Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.75■□□□□ 0.43
Pdx1P52946 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pdx1P52946 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pdx1P52946 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.75■□□□□ 0.43
Pdx1P52946 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pdx1P52946 Gm37856-201ENSMUST00000191634 999 ntBASIC17.75■□□□□ 0.43
Pdx1P52946 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.75■□□□□ 0.43
Pdx1P52946 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Pdx1P52946 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdx1P52946 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.74■□□□□ 0.43
Pdx1P52946 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pdx1P52946 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdx1P52946 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pdx1P52946 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdx1P52946 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.74■□□□□ 0.43
Pdx1P52946 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdx1P52946 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.74■□□□□ 0.43
Pdx1P52946 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.74■□□□□ 0.43
Pdx1P52946 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pdx1P52946 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdx1P52946 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pdx1P52946 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdx1P52946 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdx1P52946 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pdx1P52946 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdx1P52946 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pdx1P52946 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pdx1P52946 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.74■□□□□ 0.43
Pdx1P52946 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdx1P52946 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdx1P52946 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdx1P52946 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdx1P52946 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.73■□□□□ 0.43
Pdx1P52946 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pdx1P52946 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.73■□□□□ 0.43
Pdx1P52946 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Pdx1P52946 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdx1P52946 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdx1P52946 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.73■□□□□ 0.43
Pdx1P52946 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
Pdx1P52946 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdx1P52946 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdx1P52946 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.72■□□□□ 0.43
Pdx1P52946 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdx1P52946 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.72■□□□□ 0.43
Pdx1P52946 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Pdx1P52946 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Pdx1P52946 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdx1P52946 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdx1P52946 Gm10653-202ENSMUST00000139570 835 ntBASIC17.72■□□□□ 0.43
Pdx1P52946 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdx1P52946 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdx1P52946 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdx1P52946 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Pdx1P52946 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.72■□□□□ 0.43
Pdx1P52946 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdx1P52946 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdx1P52946 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.72■□□□□ 0.43
Pdx1P52946 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdx1P52946 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdx1P52946 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdx1P52946 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdx1P52946 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pdx1P52946 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdx1P52946 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pdx1P52946 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdx1P52946 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdx1P52946 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.71■□□□□ 0.43
Pdx1P52946 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Pdx1P52946 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pdx1P52946 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.71■□□□□ 0.42
Pdx1P52946 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pdx1P52946 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pdx1P52946 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pdx1P52946 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pdx1P52946 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdx1P52946 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdx1P52946 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdx1P52946 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdx1P52946 Trmt13-210ENSMUST00000198454 880 ntBASIC17.7■□□□□ 0.42
Pdx1P52946 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms