Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.37■□□□□ 0.53
SftpbP50405 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.37■□□□□ 0.53
SftpbP50405 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SftpbP50405 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
SftpbP50405 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SftpbP50405 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SftpbP50405 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SftpbP50405 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SftpbP50405 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SftpbP50405 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.37■□□□□ 0.53
SftpbP50405 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.37■□□□□ 0.53
SftpbP50405 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SftpbP50405 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SftpbP50405 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SftpbP50405 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SftpbP50405 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SftpbP50405 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SftpbP50405 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Nespas-201ENSMUST00000143738 1083 ntBASIC18.36■□□□□ 0.53
SftpbP50405 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Gm6420-201ENSMUST00000193885 723 ntBASIC18.36■□□□□ 0.53
SftpbP50405 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SftpbP50405 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SftpbP50405 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SftpbP50405 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SftpbP50405 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SftpbP50405 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SftpbP50405 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.35■□□□□ 0.53
SftpbP50405 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SftpbP50405 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SftpbP50405 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.35■□□□□ 0.53
SftpbP50405 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.35■□□□□ 0.53
SftpbP50405 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SftpbP50405 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SftpbP50405 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SftpbP50405 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SftpbP50405 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.34■□□□□ 0.53
SftpbP50405 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SftpbP50405 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SftpbP50405 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SftpbP50405 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SftpbP50405 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SftpbP50405 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SftpbP50405 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.34■□□□□ 0.53
SftpbP50405 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.34■□□□□ 0.53
SftpbP50405 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.34■□□□□ 0.53
SftpbP50405 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SftpbP50405 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SftpbP50405 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SftpbP50405 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.34■□□□□ 0.53
SftpbP50405 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SftpbP50405 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SftpbP50405 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.33■□□□□ 0.53
SftpbP50405 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SftpbP50405 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SftpbP50405 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SftpbP50405 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.33■□□□□ 0.52
SftpbP50405 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SftpbP50405 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.33■□□□□ 0.52
SftpbP50405 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SftpbP50405 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SftpbP50405 Gm10493-201ENSMUST00000097270 612 ntBASIC18.33■□□□□ 0.52
SftpbP50405 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SftpbP50405 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.33■□□□□ 0.52
SftpbP50405 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SftpbP50405 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.33■□□□□ 0.52
SftpbP50405 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SftpbP50405 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SftpbP50405 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SftpbP50405 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SftpbP50405 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.32■□□□□ 0.52
SftpbP50405 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SftpbP50405 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SftpbP50405 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SftpbP50405 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SftpbP50405 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SftpbP50405 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SftpbP50405 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SftpbP50405 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SftpbP50405 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SftpbP50405 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SftpbP50405 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.31■□□□□ 0.52
SftpbP50405 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SftpbP50405 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms