Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli1P47806 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli1P47806 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli1P47806 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.49■□□□□ 0.39
Gli1P47806 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli1P47806 Gm20760-201ENSMUST00000179197 648 ntBASIC17.49■□□□□ 0.39
Gli1P47806 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gli1P47806 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.49■□□□□ 0.39
Gli1P47806 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli1P47806 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli1P47806 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.49■□□□□ 0.39
Gli1P47806 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Gli1P47806 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gli1P47806 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gli1P47806 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Gli1P47806 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gli1P47806 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Gli1P47806 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gli1P47806 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gli1P47806 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gli1P47806 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gli1P47806 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Gli1P47806 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gli1P47806 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Gli1P47806 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gli1P47806 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gli1P47806 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gli1P47806 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gli1P47806 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.47■□□□□ 0.39
Gli1P47806 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gli1P47806 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gli1P47806 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gli1P47806 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.47■□□□□ 0.39
Gli1P47806 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gli1P47806 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gli1P47806 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Gli1P47806 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gli1P47806 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gli1P47806 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gli1P47806 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.46■□□□□ 0.39
Gli1P47806 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Gli1P47806 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gli1P47806 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Gli1P47806 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Gli1P47806 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.46■□□□□ 0.39
Gli1P47806 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gli1P47806 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gli1P47806 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gli1P47806 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Gli1P47806 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.46■□□□□ 0.39
Gli1P47806 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gli1P47806 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gli1P47806 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gli1P47806 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gli1P47806 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gli1P47806 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gli1P47806 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gli1P47806 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gli1P47806 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Gli1P47806 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Gli1P47806 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.45■□□□□ 0.38
Gli1P47806 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.45■□□□□ 0.38
Gli1P47806 Gm5408-201ENSMUST00000197998 747 ntBASIC17.45■□□□□ 0.38
Gli1P47806 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gli1P47806 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Gli1P47806 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gli1P47806 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gli1P47806 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gli1P47806 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gli1P47806 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gli1P47806 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gli1P47806 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Gli1P47806 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gli1P47806 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Gli1P47806 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Gli1P47806 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gli1P47806 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli1P47806 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli1P47806 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli1P47806 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli1P47806 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.44■□□□□ 0.38
Gli1P47806 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli1P47806 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gli1P47806 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli1P47806 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.44■□□□□ 0.38
Gli1P47806 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli1P47806 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Gli1P47806 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.44■□□□□ 0.38
Gli1P47806 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gli1P47806 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.44■□□□□ 0.38
Gli1P47806 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli1P47806 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gli1P47806 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.43■□□□□ 0.38
Gli1P47806 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.43■□□□□ 0.38
Gli1P47806 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gli1P47806 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gli1P47806 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.43■□□□□ 0.38
Gli1P47806 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.43■□□□□ 0.38
Gli1P47806 Gm8520-201ENSMUST00000186517 868 ntBASIC17.43■□□□□ 0.38
Gli1P47806 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms