Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.48■□□□□ 0.55
Msh2P43247 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Msh2P43247 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh2P43247 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh2P43247 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh2P43247 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh2P43247 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh2P43247 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Msh2P43247 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.47■□□□□ 0.55
Msh2P43247 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.47■□□□□ 0.55
Msh2P43247 Gm6420-201ENSMUST00000193885 723 ntBASIC18.47■□□□□ 0.55
Msh2P43247 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.47■□□□□ 0.55
Msh2P43247 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.47■□□□□ 0.55
Msh2P43247 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.47■□□□□ 0.55
Msh2P43247 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh2P43247 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh2P43247 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Msh2P43247 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh2P43247 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh2P43247 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Msh2P43247 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh2P43247 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Msh2P43247 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Msh2P43247 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh2P43247 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Msh2P43247 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh2P43247 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Msh2P43247 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Msh2P43247 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Msh2P43247 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh2P43247 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh2P43247 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.46■□□□□ 0.55
Msh2P43247 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Msh2P43247 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh2P43247 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Msh2P43247 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh2P43247 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Msh2P43247 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.46■□□□□ 0.55
Msh2P43247 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh2P43247 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Msh2P43247 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.45■□□□□ 0.54
Msh2P43247 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.45■□□□□ 0.54
Msh2P43247 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.45■□□□□ 0.54
Msh2P43247 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.45■□□□□ 0.54
Msh2P43247 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh2P43247 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Msh2P43247 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.45■□□□□ 0.54
Msh2P43247 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Msh2P43247 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Msh2P43247 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.44■□□□□ 0.54
Msh2P43247 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Nespas-201ENSMUST00000143738 1083 ntBASIC18.44■□□□□ 0.54
Msh2P43247 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.44■□□□□ 0.54
Msh2P43247 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.44■□□□□ 0.54
Msh2P43247 Gm37179-201ENSMUST00000194862 823 ntBASIC18.44■□□□□ 0.54
Msh2P43247 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Msh2P43247 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Msh2P43247 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh2P43247 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.43■□□□□ 0.54
Msh2P43247 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.43■□□□□ 0.54
Msh2P43247 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.43■□□□□ 0.54
Msh2P43247 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh2P43247 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Msh2P43247 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.43■□□□□ 0.54
Msh2P43247 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Msh2P43247 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh2P43247 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh2P43247 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh2P43247 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh2P43247 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh2P43247 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.43■□□□□ 0.54
Msh2P43247 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh2P43247 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms