Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm10252-201ENSMUST00000209541 832 ntBASIC17.02■□□□□ 0.32
Slc6a11P31650 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a11P31650 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a11P31650 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a11P31650 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Slc6a11P31650 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc6a11P31650 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.02■□□□□ 0.31
Slc6a11P31650 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc6a11P31650 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc6a11P31650 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc6a11P31650 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Slc6a11P31650 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.01■□□□□ 0.31
Slc6a11P31650 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc6a11P31650 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slc6a11P31650 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a11P31650 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a11P31650 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a11P31650 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17■□□□□ 0.31
Slc6a11P31650 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17■□□□□ 0.31
Slc6a11P31650 Mir7071-201ENSMUST00000184847 69 ntBASIC17■□□□□ 0.31
Slc6a11P31650 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17■□□□□ 0.31
Slc6a11P31650 Gm5408-201ENSMUST00000197998 747 ntBASIC17■□□□□ 0.31
Slc6a11P31650 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a11P31650 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17■□□□□ 0.31
Slc6a11P31650 Tgds-204ENSMUST00000228543 1594 ntBASIC17■□□□□ 0.31
Slc6a11P31650 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slc6a11P31650 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc6a11P31650 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a11P31650 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a11P31650 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a11P31650 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.99■□□□□ 0.31
Slc6a11P31650 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a11P31650 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.99■□□□□ 0.31
Slc6a11P31650 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a11P31650 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a11P31650 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a11P31650 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Slc6a11P31650 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a11P31650 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a11P31650 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc6a11P31650 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.98■□□□□ 0.31
Slc6a11P31650 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Slc6a11P31650 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.98■□□□□ 0.31
Slc6a11P31650 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.98■□□□□ 0.31
Slc6a11P31650 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
Slc6a11P31650 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.98■□□□□ 0.31
Slc6a11P31650 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Slc6a11P31650 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.98■□□□□ 0.31
Slc6a11P31650 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a11P31650 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a11P31650 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a11P31650 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a11P31650 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Slc6a11P31650 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Slc6a11P31650 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a11P31650 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a11P31650 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.97■□□□□ 0.31
Slc6a11P31650 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a11P31650 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a11P31650 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a11P31650 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a11P31650 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a11P31650 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a11P31650 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Slc6a11P31650 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a11P31650 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.96■□□□□ 0.31
Slc6a11P31650 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a11P31650 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a11P31650 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Slc6a11P31650 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a11P31650 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slc6a11P31650 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slc6a11P31650 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms