Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vcam1P29533 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcam1P29533 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcam1P29533 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcam1P29533 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vcam1P29533 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vcam1P29533 Golph3-205ENSMUST00000228671 2842 ntBASIC20.73■□□□□ 0.91
Vcam1P29533 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vcam1P29533 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Vcam1P29533 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vcam1P29533 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vcam1P29533 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vcam1P29533 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Vcam1P29533 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Vcam1P29533 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vcam1P29533 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vcam1P29533 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vcam1P29533 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Vcam1P29533 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vcam1P29533 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vcam1P29533 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.71■□□□□ 0.91
Vcam1P29533 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.71■□□□□ 0.91
Vcam1P29533 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vcam1P29533 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vcam1P29533 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Vcam1P29533 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.71■□□□□ 0.91
Vcam1P29533 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vcam1P29533 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Vcam1P29533 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.7■□□□□ 0.9
Vcam1P29533 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vcam1P29533 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vcam1P29533 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Vcam1P29533 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vcam1P29533 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vcam1P29533 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.7■□□□□ 0.9
Vcam1P29533 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vcam1P29533 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.7■□□□□ 0.9
Vcam1P29533 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vcam1P29533 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vcam1P29533 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vcam1P29533 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Vcam1P29533 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vcam1P29533 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vcam1P29533 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vcam1P29533 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vcam1P29533 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.69■□□□□ 0.9
Vcam1P29533 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.69■□□□□ 0.9
Vcam1P29533 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Vcam1P29533 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vcam1P29533 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.69■□□□□ 0.9
Vcam1P29533 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.69■□□□□ 0.9
Vcam1P29533 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vcam1P29533 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vcam1P29533 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vcam1P29533 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vcam1P29533 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcam1P29533 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcam1P29533 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcam1P29533 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcam1P29533 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Vcam1P29533 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.68■□□□□ 0.9
Vcam1P29533 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vcam1P29533 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcam1P29533 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcam1P29533 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcam1P29533 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vcam1P29533 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vcam1P29533 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcam1P29533 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vcam1P29533 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vcam1P29533 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Vcam1P29533 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.67■□□□□ 0.9
Vcam1P29533 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vcam1P29533 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vcam1P29533 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.67■□□□□ 0.9
Vcam1P29533 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Vcam1P29533 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vcam1P29533 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vcam1P29533 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vcam1P29533 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vcam1P29533 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Vcam1P29533 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Vcam1P29533 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.67■□□□□ 0.9
Vcam1P29533 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Vcam1P29533 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vcam1P29533 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vcam1P29533 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vcam1P29533 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vcam1P29533 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Vcam1P29533 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.66■□□□□ 0.9
Vcam1P29533 Gm27463-201ENSMUST00000183569 57 ntBASIC20.66■□□□□ 0.9
Vcam1P29533 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vcam1P29533 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vcam1P29533 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.66■□□□□ 0.9
Vcam1P29533 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vcam1P29533 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Vcam1P29533 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Vcam1P29533 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vcam1P29533 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Vcam1P29533 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms