Protein–RNA interactions for Protein: P25785

Timp2, Metalloproteinase inhibitor 2, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp2P25785 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Timp2P25785 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Timp2P25785 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.6■□□□□ 0.41
Timp2P25785 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Timp2P25785 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.6■□□□□ 0.41
Timp2P25785 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Timp2P25785 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Timp2P25785 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Timp2P25785 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Timp2P25785 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Timp2P25785 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Timp2P25785 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Timp2P25785 Gm11643-201ENSMUST00000119578 864 ntBASIC17.59■□□□□ 0.41
Timp2P25785 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.59■□□□□ 0.41
Timp2P25785 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.59■□□□□ 0.41
Timp2P25785 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.59■□□□□ 0.41
Timp2P25785 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Timp2P25785 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Timp2P25785 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.58■□□□□ 0.41
Timp2P25785 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Timp2P25785 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Timp2P25785 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Timp2P25785 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Timp2P25785 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Timp2P25785 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Timp2P25785 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Timp2P25785 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Timp2P25785 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Timp2P25785 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Timp2P25785 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Timp2P25785 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.57■□□□□ 0.4
Timp2P25785 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Timp2P25785 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Gm15565-201ENSMUST00000118890 427 ntBASIC17.57■□□□□ 0.4
Timp2P25785 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Timp2P25785 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.57■□□□□ 0.4
Timp2P25785 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Timp2P25785 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Timp2P25785 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Timp2P25785 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Timp2P25785 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Timp2P25785 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Timp2P25785 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Timp2P25785 Gm21814-202ENSMUST00000203277 873 ntBASIC17.56■□□□□ 0.4
Timp2P25785 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.56■□□□□ 0.4
Timp2P25785 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timp2P25785 Gm5417-201ENSMUST00000079706 384 ntBASIC17.56■□□□□ 0.4
Timp2P25785 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timp2P25785 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timp2P25785 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Timp2P25785 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timp2P25785 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Timp2P25785 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Timp2P25785 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.55■□□□□ 0.4
Timp2P25785 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.55■□□□□ 0.4
Timp2P25785 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Timp2P25785 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.55■□□□□ 0.4
Timp2P25785 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.55■□□□□ 0.4
Timp2P25785 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.55■□□□□ 0.4
Timp2P25785 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.55■□□□□ 0.4
Timp2P25785 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Gm44487-201ENSMUST00000205145 325 ntBASIC17.55■□□□□ 0.4
Timp2P25785 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.55■□□□□ 0.4
Timp2P25785 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Fst-202ENSMUST00000223640 2612 ntBASIC17.55■□□□□ 0.4
Timp2P25785 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Timp2P25785 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.55■□□□□ 0.4
Timp2P25785 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Timp2P25785 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timp2P25785 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timp2P25785 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timp2P25785 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timp2P25785 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timp2P25785 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Timp2P25785 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.54■□□□□ 0.4
Timp2P25785 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms