Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.62■□□□□ 0.25
Tnfrsf1bP25119 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1bP25119 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.62■□□□□ 0.25
Tnfrsf1bP25119 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1bP25119 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1bP25119 Mtag2-201ENSMUST00000058665 714 ntBASIC16.62■□□□□ 0.25
Tnfrsf1bP25119 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Tnfrsf1bP25119 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1bP25119 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1bP25119 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1bP25119 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1bP25119 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Fst-202ENSMUST00000223640 2612 ntBASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1bP25119 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf1bP25119 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1bP25119 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf1bP25119 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf1bP25119 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf1bP25119 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf1bP25119 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.58■□□□□ 0.25
Tnfrsf1bP25119 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf1bP25119 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1bP25119 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1bP25119 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1bP25119 Gm13158-201ENSMUST00000122007 736 ntBASIC16.58■□□□□ 0.24
Tnfrsf1bP25119 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.58■□□□□ 0.24
Tnfrsf1bP25119 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1bP25119 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Tnfrsf1bP25119 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Tnfrsf1bP25119 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1bP25119 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1bP25119 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1bP25119 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1bP25119 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf1bP25119 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf1bP25119 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tnfrsf1bP25119 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf1bP25119 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.57■□□□□ 0.24
Tnfrsf1bP25119 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf1bP25119 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf1bP25119 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.57■□□□□ 0.24
Tnfrsf1bP25119 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf1bP25119 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf1bP25119 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.56■□□□□ 0.24
Tnfrsf1bP25119 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf1bP25119 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf1bP25119 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf1bP25119 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf1bP25119 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.56■□□□□ 0.24
Tnfrsf1bP25119 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf1bP25119 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms