Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Clk1P22518 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clk1P22518 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Clk1P22518 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.65■□□□□ 0.26
Clk1P22518 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.65■□□□□ 0.26
Clk1P22518 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Clk1P22518 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.65■□□□□ 0.26
Clk1P22518 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clk1P22518 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clk1P22518 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Clk1P22518 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk1P22518 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk1P22518 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk1P22518 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clk1P22518 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Clk1P22518 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk1P22518 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk1P22518 Gm6211-202ENSMUST00000167849 925 ntBASIC16.64■□□□□ 0.25
Clk1P22518 Gm37179-201ENSMUST00000194862 823 ntBASIC16.64■□□□□ 0.25
Clk1P22518 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk1P22518 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Clk1P22518 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.64■□□□□ 0.25
Clk1P22518 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Clk1P22518 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk1P22518 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk1P22518 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.64■□□□□ 0.25
Clk1P22518 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk1P22518 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk1P22518 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Clk1P22518 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.64■□□□□ 0.25
Clk1P22518 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Clk1P22518 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.63■□□□□ 0.25
Clk1P22518 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.63■□□□□ 0.25
Clk1P22518 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Clk1P22518 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Clk1P22518 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk1P22518 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Clk1P22518 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.62■□□□□ 0.25
Clk1P22518 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.62■□□□□ 0.25
Clk1P22518 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.62■□□□□ 0.25
Clk1P22518 Mir5133-201ENSMUST00000174955 77 ntBASIC16.62■□□□□ 0.25
Clk1P22518 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.62■□□□□ 0.25
Clk1P22518 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.62■□□□□ 0.25
Clk1P22518 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.62■□□□□ 0.25
Clk1P22518 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Clk1P22518 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clk1P22518 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Clk1P22518 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clk1P22518 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clk1P22518 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clk1P22518 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clk1P22518 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.61■□□□□ 0.25
Clk1P22518 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Clk1P22518 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Clk1P22518 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clk1P22518 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clk1P22518 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Clk1P22518 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clk1P22518 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clk1P22518 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms