Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
BdnfP21237 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BdnfP21237 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.17■□□□□ 0.34
BdnfP21237 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BdnfP21237 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.17■□□□□ 0.34
BdnfP21237 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BdnfP21237 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BdnfP21237 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BdnfP21237 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BdnfP21237 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BdnfP21237 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BdnfP21237 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BdnfP21237 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
BdnfP21237 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BdnfP21237 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BdnfP21237 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BdnfP21237 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BdnfP21237 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BdnfP21237 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BdnfP21237 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
BdnfP21237 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
BdnfP21237 Gm10493-201ENSMUST00000097270 612 ntBASIC17.16■□□□□ 0.34
BdnfP21237 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BdnfP21237 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BdnfP21237 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
BdnfP21237 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BdnfP21237 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.16■□□□□ 0.34
BdnfP21237 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BdnfP21237 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
BdnfP21237 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BdnfP21237 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.15■□□□□ 0.34
BdnfP21237 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BdnfP21237 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.15■□□□□ 0.34
BdnfP21237 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.15■□□□□ 0.34
BdnfP21237 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.15■□□□□ 0.34
BdnfP21237 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.15■□□□□ 0.34
BdnfP21237 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BdnfP21237 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BdnfP21237 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.15■□□□□ 0.34
BdnfP21237 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BdnfP21237 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BdnfP21237 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BdnfP21237 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
BdnfP21237 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.14■□□□□ 0.34
BdnfP21237 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.14■□□□□ 0.33
BdnfP21237 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
BdnfP21237 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.14■□□□□ 0.33
BdnfP21237 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
BdnfP21237 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BdnfP21237 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BdnfP21237 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BdnfP21237 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BdnfP21237 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BdnfP21237 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BdnfP21237 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BdnfP21237 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
BdnfP21237 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
BdnfP21237 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BdnfP21237 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.13■□□□□ 0.33
BdnfP21237 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.13■□□□□ 0.33
BdnfP21237 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
BdnfP21237 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
BdnfP21237 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BdnfP21237 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BdnfP21237 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BdnfP21237 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BdnfP21237 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BdnfP21237 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BdnfP21237 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BdnfP21237 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BdnfP21237 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BdnfP21237 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BdnfP21237 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BdnfP21237 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BdnfP21237 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BdnfP21237 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
BdnfP21237 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.12■□□□□ 0.33
BdnfP21237 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BdnfP21237 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BdnfP21237 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BdnfP21237 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BdnfP21237 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BdnfP21237 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BdnfP21237 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BdnfP21237 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.11■□□□□ 0.33
BdnfP21237 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BdnfP21237 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BdnfP21237 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms