Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd44P15379 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd44P15379 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.84■□□□□ 0.61
Cd44P15379 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd44P15379 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd44P15379 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd44P15379 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.84■□□□□ 0.61
Cd44P15379 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Cd44P15379 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.84■□□□□ 0.61
Cd44P15379 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Cd44P15379 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.84■□□□□ 0.61
Cd44P15379 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.84■□□□□ 0.61
Cd44P15379 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.84■□□□□ 0.61
Cd44P15379 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd44P15379 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.84■□□□□ 0.61
Cd44P15379 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd44P15379 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.84■□□□□ 0.61
Cd44P15379 Gm10493-201ENSMUST00000097270 612 ntBASIC18.84■□□□□ 0.61
Cd44P15379 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cd44P15379 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.84■□□□□ 0.61
Cd44P15379 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd44P15379 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd44P15379 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd44P15379 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd44P15379 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd44P15379 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cd44P15379 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cd44P15379 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd44P15379 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Cd44P15379 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cd44P15379 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Cd44P15379 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd44P15379 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd44P15379 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.83■□□□□ 0.6
Cd44P15379 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd44P15379 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.83■□□□□ 0.6
Cd44P15379 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd44P15379 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cd44P15379 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cd44P15379 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd44P15379 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd44P15379 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Cd44P15379 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd44P15379 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd44P15379 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd44P15379 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cd44P15379 Gm10033-202ENSMUST00000211874 928 ntBASIC18.82■□□□□ 0.6
Cd44P15379 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd44P15379 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd44P15379 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd44P15379 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd44P15379 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd44P15379 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.82■□□□□ 0.6
Cd44P15379 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd44P15379 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd44P15379 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.81■□□□□ 0.6
Cd44P15379 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd44P15379 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd44P15379 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd44P15379 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd44P15379 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd44P15379 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Cd44P15379 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd44P15379 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd44P15379 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cd44P15379 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd44P15379 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cd44P15379 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cd44P15379 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cd44P15379 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.8■□□□□ 0.6
Cd44P15379 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.8■□□□□ 0.6
Cd44P15379 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 Gm7514-201ENSMUST00000209475 934 ntBASIC18.8■□□□□ 0.6
Cd44P15379 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd44P15379 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd44P15379 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.79■□□□□ 0.6
Cd44P15379 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd44P15379 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Cd44P15379 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd44P15379 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.79■□□□□ 0.6
Cd44P15379 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd44P15379 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd44P15379 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd44P15379 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cd44P15379 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Cd44P15379 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd44P15379 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd44P15379 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms