Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp54P14576 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp54P14576 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp54P14576 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp54P14576 Gm15375-201ENSMUST00000119510 849 ntBASIC17.6■□□□□ 0.41
Srp54P14576 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Srp54P14576 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp54P14576 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Srp54P14576 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp54P14576 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.6■□□□□ 0.41
Srp54P14576 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Srp54P14576 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp54P14576 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp54P14576 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp54P14576 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp54P14576 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.59■□□□□ 0.41
Srp54P14576 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Srp54P14576 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.59■□□□□ 0.41
Srp54P14576 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.59■□□□□ 0.41
Srp54P14576 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Srp54P14576 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.59■□□□□ 0.41
Srp54P14576 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Srp54P14576 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Srp54P14576 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Srp54P14576 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp54P14576 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.58■□□□□ 0.41
Srp54P14576 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Srp54P14576 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Srp54P14576 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.58■□□□□ 0.41
Srp54P14576 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Srp54P14576 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Srp54P14576 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Srp54P14576 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.58■□□□□ 0.41
Srp54P14576 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Srp54P14576 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp54P14576 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Srp54P14576 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Srp54P14576 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Srp54P14576 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp54P14576 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp54P14576 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.58■□□□□ 0.4
Srp54P14576 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp54P14576 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp54P14576 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp54P14576 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp54P14576 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Srp54P14576 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp54P14576 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp54P14576 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Srp54P14576 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Srp54P14576 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.57■□□□□ 0.4
Srp54P14576 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Srp54P14576 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.57■□□□□ 0.4
Srp54P14576 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Srp54P14576 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Srp54P14576 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srp54P14576 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srp54P14576 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srp54P14576 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srp54P14576 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srp54P14576 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srp54P14576 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srp54P14576 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Srp54P14576 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Srp54P14576 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp54P14576 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.56■□□□□ 0.4
Srp54P14576 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp54P14576 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp54P14576 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Srp54P14576 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp54P14576 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp54P14576 Gm43183-201ENSMUST00000200632 547 ntBASIC17.56■□□□□ 0.4
Srp54P14576 Gm18025-201ENSMUST00000221733 862 ntBASIC17.56■□□□□ 0.4
Srp54P14576 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp54P14576 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp54P14576 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp54P14576 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Srp54P14576 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp54P14576 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Srp54P14576 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp54P14576 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Srp54P14576 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp54P14576 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp54P14576 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp54P14576 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp54P14576 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp54P14576 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms