Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gm15375-201ENSMUST00000119510 849 ntBASIC17.18■□□□□ 0.34
Cntn1P12960 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cntn1P12960 Gm6576-201ENSMUST00000169678 883 ntBASIC17.18■□□□□ 0.34
Cntn1P12960 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cntn1P12960 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cntn1P12960 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cntn1P12960 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.18■□□□□ 0.34
Cntn1P12960 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.18■□□□□ 0.34
Cntn1P12960 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cntn1P12960 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cntn1P12960 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cntn1P12960 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cntn1P12960 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cntn1P12960 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.18■□□□□ 0.34
Cntn1P12960 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cntn1P12960 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cntn1P12960 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cntn1P12960 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.17■□□□□ 0.34
Cntn1P12960 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cntn1P12960 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cntn1P12960 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cntn1P12960 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.17■□□□□ 0.34
Cntn1P12960 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cntn1P12960 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cntn1P12960 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
Cntn1P12960 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cntn1P12960 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cntn1P12960 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cntn1P12960 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cntn1P12960 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cntn1P12960 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cntn1P12960 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cntn1P12960 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.16■□□□□ 0.34
Cntn1P12960 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.16■□□□□ 0.34
Cntn1P12960 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cntn1P12960 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cntn1P12960 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cntn1P12960 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cntn1P12960 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cntn1P12960 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cntn1P12960 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cntn1P12960 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.15■□□□□ 0.34
Cntn1P12960 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cntn1P12960 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cntn1P12960 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cntn1P12960 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cntn1P12960 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cntn1P12960 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cntn1P12960 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cntn1P12960 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cntn1P12960 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cntn1P12960 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cntn1P12960 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.14■□□□□ 0.33
Cntn1P12960 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.14■□□□□ 0.33
Cntn1P12960 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.14■□□□□ 0.33
Cntn1P12960 Mir6982-201ENSMUST00000184354 68 ntBASIC17.14■□□□□ 0.33
Cntn1P12960 Gm42545-201ENSMUST00000202755 922 ntBASIC17.14■□□□□ 0.33
Cntn1P12960 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cntn1P12960 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cntn1P12960 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.14■□□□□ 0.33
Cntn1P12960 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cntn1P12960 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cntn1P12960 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cntn1P12960 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cntn1P12960 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cntn1P12960 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.13■□□□□ 0.33
Cntn1P12960 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cntn1P12960 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Mir1199-201ENSMUST00000117015 119 ntBASIC17.13■□□□□ 0.33
Cntn1P12960 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.13■□□□□ 0.33
Cntn1P12960 Gm18025-201ENSMUST00000221733 862 ntBASIC17.13■□□□□ 0.33
Cntn1P12960 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cntn1P12960 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.13■□□□□ 0.33
Cntn1P12960 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cntn1P12960 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cntn1P12960 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.12■□□□□ 0.33
Cntn1P12960 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.12■□□□□ 0.33
Cntn1P12960 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.12■□□□□ 0.33
Cntn1P12960 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cntn1P12960 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cntn1P12960 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.12■□□□□ 0.33
Cntn1P12960 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms