Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
PtcraP0C6B2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PtcraP0C6B2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PtcraP0C6B2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PtcraP0C6B2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PtcraP0C6B2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PtcraP0C6B2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
PtcraP0C6B2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PtcraP0C6B2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
PtcraP0C6B2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PtcraP0C6B2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Gm10418-201ENSMUST00000100943 576 ntBASIC15.58■□□□□ 0.08
PtcraP0C6B2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.58■□□□□ 0.08
PtcraP0C6B2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PtcraP0C6B2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.57■□□□□ 0.08
PtcraP0C6B2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
PtcraP0C6B2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PtcraP0C6B2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Gm20049-201ENSMUST00000219950 730 ntBASIC15.57■□□□□ 0.08
PtcraP0C6B2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PtcraP0C6B2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PtcraP0C6B2 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.57■□□□□ 0.08
PtcraP0C6B2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PtcraP0C6B2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Gm12896-201ENSMUST00000118430 226 ntBASIC15.56■□□□□ 0.08
PtcraP0C6B2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PtcraP0C6B2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Mir6349-201ENSMUST00000184059 97 ntBASIC15.56■□□□□ 0.08
PtcraP0C6B2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PtcraP0C6B2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PtcraP0C6B2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Gm8969-201ENSMUST00000199694 526 ntBASIC15.55■□□□□ 0.08
PtcraP0C6B2 Gm10138-203ENSMUST00000206952 366 ntBASIC15.55■□□□□ 0.08
PtcraP0C6B2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PtcraP0C6B2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.54■□□□□ 0.08
PtcraP0C6B2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PtcraP0C6B2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PtcraP0C6B2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PtcraP0C6B2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PtcraP0C6B2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PtcraP0C6B2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PtcraP0C6B2 Rarb-207ENSMUST00000225921 2756 ntBASIC15.54■□□□□ 0.08
PtcraP0C6B2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PtcraP0C6B2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PtcraP0C6B2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PtcraP0C6B2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PtcraP0C6B2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms