Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.26■□□□□ 0.51
Rc3h2P0C090 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h2P0C090 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rc3h2P0C090 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h2P0C090 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.25■□□□□ 0.51
Rc3h2P0C090 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h2P0C090 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h2P0C090 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h2P0C090 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.25■□□□□ 0.51
Rc3h2P0C090 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rc3h2P0C090 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.25■□□□□ 0.51
Rc3h2P0C090 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.25■□□□□ 0.51
Rc3h2P0C090 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rc3h2P0C090 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rc3h2P0C090 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rc3h2P0C090 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.24■□□□□ 0.51
Rc3h2P0C090 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.24■□□□□ 0.51
Rc3h2P0C090 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Gm9987-201ENSMUST00000069768 567 ntBASIC18.24■□□□□ 0.51
Rc3h2P0C090 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rc3h2P0C090 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h2P0C090 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h2P0C090 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h2P0C090 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h2P0C090 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.23■□□□□ 0.51
Rc3h2P0C090 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h2P0C090 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rc3h2P0C090 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.23■□□□□ 0.51
Rc3h2P0C090 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rc3h2P0C090 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.23■□□□□ 0.51
Rc3h2P0C090 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.22■□□□□ 0.51
Rc3h2P0C090 Gm11643-201ENSMUST00000119578 864 ntBASIC18.22■□□□□ 0.51
Rc3h2P0C090 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Gm43799-201ENSMUST00000201845 579 ntBASIC18.22■□□□□ 0.51
Rc3h2P0C090 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Odf3b-204ENSMUST00000227834 930 ntBASIC18.22■□□□□ 0.51
Rc3h2P0C090 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rc3h2P0C090 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rc3h2P0C090 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Timm23-208ENSMUST00000226683 750 ntBASIC18.21■□□□□ 0.51
Rc3h2P0C090 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rc3h2P0C090 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.21■□□□□ 0.51
Rc3h2P0C090 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rc3h2P0C090 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rc3h2P0C090 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.2■□□□□ 0.5
Rc3h2P0C090 Gm6433-201ENSMUST00000118634 875 ntBASIC18.2■□□□□ 0.5
Rc3h2P0C090 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms