Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TnfP06804 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TnfP06804 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TnfP06804 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TnfP06804 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
TnfP06804 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TnfP06804 Gm15565-201ENSMUST00000118890 427 ntBASIC19.05■□□□□ 0.64
TnfP06804 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.05■□□□□ 0.64
TnfP06804 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TnfP06804 Gm5417-201ENSMUST00000079706 384 ntBASIC19.05■□□□□ 0.64
TnfP06804 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TnfP06804 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TnfP06804 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.05■□□□□ 0.64
TnfP06804 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.05■□□□□ 0.64
TnfP06804 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TnfP06804 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TnfP06804 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TnfP06804 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TnfP06804 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.04■□□□□ 0.64
TnfP06804 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TnfP06804 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TnfP06804 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.04■□□□□ 0.64
TnfP06804 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
TnfP06804 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.04■□□□□ 0.64
TnfP06804 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.04■□□□□ 0.64
TnfP06804 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TnfP06804 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.04■□□□□ 0.64
TnfP06804 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TnfP06804 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TnfP06804 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TnfP06804 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TnfP06804 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TnfP06804 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TnfP06804 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TnfP06804 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TnfP06804 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
TnfP06804 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TnfP06804 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TnfP06804 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TnfP06804 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TnfP06804 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.03■□□□□ 0.64
TnfP06804 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.03■□□□□ 0.64
TnfP06804 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.03■□□□□ 0.64
TnfP06804 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.03■□□□□ 0.64
TnfP06804 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.03■□□□□ 0.64
TnfP06804 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TnfP06804 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.03■□□□□ 0.64
TnfP06804 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TnfP06804 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TnfP06804 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TnfP06804 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TnfP06804 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TnfP06804 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TnfP06804 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TnfP06804 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TnfP06804 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TnfP06804 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TnfP06804 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.02■□□□□ 0.64
TnfP06804 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TnfP06804 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TnfP06804 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TnfP06804 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TnfP06804 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TnfP06804 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.02■□□□□ 0.63
TnfP06804 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TnfP06804 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TnfP06804 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TnfP06804 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.01■□□□□ 0.63
TnfP06804 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TnfP06804 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.01■□□□□ 0.63
TnfP06804 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
TnfP06804 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TnfP06804 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TnfP06804 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TnfP06804 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TnfP06804 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TnfP06804 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TnfP06804 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19■□□□□ 0.63
TnfP06804 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19■□□□□ 0.63
TnfP06804 Gm11643-201ENSMUST00000119578 864 ntBASIC19■□□□□ 0.63
TnfP06804 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TnfP06804 Gm21814-202ENSMUST00000203277 873 ntBASIC19■□□□□ 0.63
TnfP06804 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TnfP06804 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TnfP06804 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19■□□□□ 0.63
TnfP06804 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TnfP06804 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TnfP06804 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TnfP06804 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TnfP06804 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TnfP06804 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TnfP06804 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TnfP06804 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TnfP06804 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TnfP06804 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TnfP06804 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.99■□□□□ 0.63
TnfP06804 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TnfP06804 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.99■□□□□ 0.63
TnfP06804 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.99■□□□□ 0.63
TnfP06804 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms