Protein–RNA interactions for Protein: O70361

Per3, Period circadian protein homolog 3, mousemouse

Predictions only

Length 1,113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per3O70361 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per3O70361 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.32■□□□□ 0.52
Per3O70361 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per3O70361 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Per3O70361 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.31■□□□□ 0.52
Per3O70361 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.31■□□□□ 0.52
Per3O70361 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Per3O70361 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Per3O70361 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Per3O70361 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per3O70361 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Per3O70361 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per3O70361 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Per3O70361 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Per3O70361 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per3O70361 Gm2399-201ENSMUST00000104944 225 ntBASIC18.3■□□□□ 0.52
Per3O70361 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Per3O70361 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Per3O70361 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Per3O70361 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Per3O70361 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Per3O70361 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Per3O70361 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per3O70361 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per3O70361 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per3O70361 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per3O70361 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Per3O70361 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.3■□□□□ 0.52
Per3O70361 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per3O70361 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.3■□□□□ 0.52
Per3O70361 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Per3O70361 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per3O70361 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per3O70361 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.29■□□□□ 0.52
Per3O70361 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per3O70361 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Per3O70361 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per3O70361 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per3O70361 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.29■□□□□ 0.52
Per3O70361 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.29■□□□□ 0.52
Per3O70361 Gm2559-201ENSMUST00000201323 363 ntBASIC18.29■□□□□ 0.52
Per3O70361 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.29■□□□□ 0.52
Per3O70361 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per3O70361 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per3O70361 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per3O70361 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Per3O70361 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.29■□□□□ 0.52
Per3O70361 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Per3O70361 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Per3O70361 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per3O70361 Grk6-206ENSMUST00000224995 2971 ntBASIC18.28■□□□□ 0.52
Per3O70361 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per3O70361 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Per3O70361 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Per3O70361 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per3O70361 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per3O70361 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.28■□□□□ 0.52
Per3O70361 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Per3O70361 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per3O70361 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.28■□□□□ 0.52
Per3O70361 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.28■□□□□ 0.52
Per3O70361 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per3O70361 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.28■□□□□ 0.52
Per3O70361 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per3O70361 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.28■□□□□ 0.52
Per3O70361 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per3O70361 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per3O70361 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.28■□□□□ 0.52
Per3O70361 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Per3O70361 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per3O70361 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per3O70361 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per3O70361 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Per3O70361 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per3O70361 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per3O70361 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Per3O70361 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Per3O70361 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per3O70361 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Per3O70361 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.27■□□□□ 0.52
Per3O70361 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Per3O70361 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.27■□□□□ 0.52
Per3O70361 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Per3O70361 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.27■□□□□ 0.52
Per3O70361 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per3O70361 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Per3O70361 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms