Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trdmt1O55055 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trdmt1O55055 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trdmt1O55055 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trdmt1O55055 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trdmt1O55055 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trdmt1O55055 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trdmt1O55055 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trdmt1O55055 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trdmt1O55055 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.81■□□□□ 0.76
Trdmt1O55055 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.81■□□□□ 0.76
Trdmt1O55055 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.81■□□□□ 0.76
Trdmt1O55055 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdmt1O55055 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trdmt1O55055 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trdmt1O55055 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trdmt1O55055 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Trdmt1O55055 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trdmt1O55055 Gm6345-202ENSMUST00000180900 204 ntBASIC19.8■□□□□ 0.76
Trdmt1O55055 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.8■□□□□ 0.76
Trdmt1O55055 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trdmt1O55055 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.8■□□□□ 0.76
Trdmt1O55055 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trdmt1O55055 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trdmt1O55055 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trdmt1O55055 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trdmt1O55055 AA414768-201ENSMUST00000121924 1257 ntBASIC19.79■□□□□ 0.76
Trdmt1O55055 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trdmt1O55055 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trdmt1O55055 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trdmt1O55055 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trdmt1O55055 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trdmt1O55055 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trdmt1O55055 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.79■□□□□ 0.76
Trdmt1O55055 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Trdmt1O55055 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trdmt1O55055 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trdmt1O55055 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.78■□□□□ 0.76
Trdmt1O55055 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trdmt1O55055 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trdmt1O55055 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trdmt1O55055 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Trdmt1O55055 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trdmt1O55055 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trdmt1O55055 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trdmt1O55055 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trdmt1O55055 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trdmt1O55055 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trdmt1O55055 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trdmt1O55055 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trdmt1O55055 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trdmt1O55055 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.77■□□□□ 0.76
Trdmt1O55055 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.77■□□□□ 0.76
Trdmt1O55055 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trdmt1O55055 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trdmt1O55055 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trdmt1O55055 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trdmt1O55055 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.76■□□□□ 0.75
Trdmt1O55055 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Trdmt1O55055 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trdmt1O55055 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trdmt1O55055 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trdmt1O55055 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trdmt1O55055 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trdmt1O55055 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.76■□□□□ 0.75
Trdmt1O55055 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.76■□□□□ 0.75
Trdmt1O55055 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trdmt1O55055 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trdmt1O55055 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trdmt1O55055 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trdmt1O55055 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trdmt1O55055 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.75■□□□□ 0.75
Trdmt1O55055 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Trdmt1O55055 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.75■□□□□ 0.75
Trdmt1O55055 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.75■□□□□ 0.75
Trdmt1O55055 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.75■□□□□ 0.75
Trdmt1O55055 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms