Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ChkaO54804 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ChkaO54804 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ChkaO54804 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ChkaO54804 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ChkaO54804 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ChkaO54804 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.09■□□□□ 0.49
ChkaO54804 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ChkaO54804 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ChkaO54804 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ChkaO54804 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ChkaO54804 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ChkaO54804 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ChkaO54804 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ChkaO54804 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ChkaO54804 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ChkaO54804 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ChkaO54804 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ChkaO54804 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
ChkaO54804 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ChkaO54804 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.08■□□□□ 0.49
ChkaO54804 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ChkaO54804 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ChkaO54804 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ChkaO54804 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.08■□□□□ 0.48
ChkaO54804 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.08■□□□□ 0.48
ChkaO54804 Gm6365-201ENSMUST00000054711 744 ntBASIC18.08■□□□□ 0.48
ChkaO54804 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.08■□□□□ 0.48
ChkaO54804 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ChkaO54804 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ChkaO54804 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ChkaO54804 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ChkaO54804 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ChkaO54804 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ChkaO54804 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.08■□□□□ 0.48
ChkaO54804 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ChkaO54804 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.08■□□□□ 0.48
ChkaO54804 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ChkaO54804 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ChkaO54804 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ChkaO54804 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ChkaO54804 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ChkaO54804 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ChkaO54804 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ChkaO54804 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
ChkaO54804 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ChkaO54804 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ChkaO54804 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ChkaO54804 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ChkaO54804 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
ChkaO54804 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.07■□□□□ 0.48
ChkaO54804 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ChkaO54804 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ChkaO54804 Idnk-204ENSMUST00000226010 1898 ntBASIC18.07■□□□□ 0.48
ChkaO54804 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ChkaO54804 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.06■□□□□ 0.48
ChkaO54804 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.06■□□□□ 0.48
ChkaO54804 Gm7291-201ENSMUST00000199147 382 ntBASIC18.06■□□□□ 0.48
ChkaO54804 Gm42569-201ENSMUST00000200539 472 ntBASIC18.06■□□□□ 0.48
ChkaO54804 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.06■□□□□ 0.48
ChkaO54804 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ChkaO54804 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ChkaO54804 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ChkaO54804 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ChkaO54804 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.05■□□□□ 0.48
ChkaO54804 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ChkaO54804 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.05■□□□□ 0.48
ChkaO54804 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ChkaO54804 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms