Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1O35604 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Npc1O35604 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Npc1O35604 Gm11249-201ENSMUST00000117071 859 ntBASIC17.5■□□□□ 0.39
Npc1O35604 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Npc1O35604 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Npc1O35604 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1O35604 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1O35604 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1O35604 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npc1O35604 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.49■□□□□ 0.39
Npc1O35604 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.49■□□□□ 0.39
Npc1O35604 Gm5643-201ENSMUST00000117081 966 ntBASIC17.49■□□□□ 0.39
Npc1O35604 Gm13158-201ENSMUST00000122007 736 ntBASIC17.49■□□□□ 0.39
Npc1O35604 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Npc1O35604 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Npc1O35604 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npc1O35604 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Npc1O35604 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1O35604 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.48■□□□□ 0.39
Npc1O35604 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1O35604 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1O35604 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1O35604 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1O35604 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npc1O35604 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.48■□□□□ 0.39
Npc1O35604 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Npc1O35604 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Npc1O35604 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Npc1O35604 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Npc1O35604 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.47■□□□□ 0.39
Npc1O35604 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.47■□□□□ 0.39
Npc1O35604 Zfp783-201ENSMUST00000095946 670 ntBASIC17.47■□□□□ 0.39
Npc1O35604 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Npc1O35604 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npc1O35604 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.47■□□□□ 0.39
Npc1O35604 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.47■□□□□ 0.39
Npc1O35604 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1O35604 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1O35604 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1O35604 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1O35604 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1O35604 Gm11927-201ENSMUST00000118472 759 ntBASIC17.46■□□□□ 0.39
Npc1O35604 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1O35604 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1O35604 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.46■□□□□ 0.39
Npc1O35604 Gm10812-201ENSMUST00000099864 546 ntBASIC17.46■□□□□ 0.39
Npc1O35604 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1O35604 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1O35604 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Npc1O35604 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npc1O35604 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1O35604 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1O35604 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1O35604 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1O35604 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1O35604 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1O35604 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Npc1O35604 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1O35604 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.45■□□□□ 0.38
Npc1O35604 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.45■□□□□ 0.38
Npc1O35604 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.45■□□□□ 0.38
Npc1O35604 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1O35604 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1O35604 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Npc1O35604 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1O35604 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Npc1O35604 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.45■□□□□ 0.38
Npc1O35604 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms