Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn6O35454 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Clcn6O35454 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Clcn6O35454 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.99■□□□□ 0.63
Clcn6O35454 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn6O35454 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC18.99■□□□□ 0.63
Clcn6O35454 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC18.99■□□□□ 0.63
Clcn6O35454 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn6O35454 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.99■□□□□ 0.63
Clcn6O35454 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn6O35454 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Clcn6O35454 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn6O35454 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn6O35454 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn6O35454 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Clcn6O35454 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.99■□□□□ 0.63
Clcn6O35454 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn6O35454 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn6O35454 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.98■□□□□ 0.63
Clcn6O35454 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.98■□□□□ 0.63
Clcn6O35454 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Clcn6O35454 Gm22709-201ENSMUST00000116893 111 ntBASIC18.98■□□□□ 0.63
Clcn6O35454 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.98■□□□□ 0.63
Clcn6O35454 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC18.98■□□□□ 0.63
Clcn6O35454 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Clcn6O35454 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.98■□□□□ 0.63
Clcn6O35454 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.98■□□□□ 0.63
Clcn6O35454 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn6O35454 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn6O35454 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clcn6O35454 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clcn6O35454 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn6O35454 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.97■□□□□ 0.63
Clcn6O35454 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.97■□□□□ 0.63
Clcn6O35454 Gm20614-201ENSMUST00000177106 632 ntBASIC18.97■□□□□ 0.63
Clcn6O35454 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC18.97■□□□□ 0.63
Clcn6O35454 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.97■□□□□ 0.63
Clcn6O35454 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.97■□□□□ 0.63
Clcn6O35454 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Clcn6O35454 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Clcn6O35454 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.97■□□□□ 0.63
Clcn6O35454 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn6O35454 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Clcn6O35454 Gm7860-201ENSMUST00000121190 879 ntBASIC18.96■□□□□ 0.63
Clcn6O35454 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Clcn6O35454 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Clcn6O35454 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Clcn6O35454 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Clcn6O35454 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Clcn6O35454 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn6O35454 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.96■□□□□ 0.63
Clcn6O35454 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Clcn6O35454 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn6O35454 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn6O35454 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn6O35454 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn6O35454 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Clcn6O35454 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.95■□□□□ 0.62
Clcn6O35454 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.95■□□□□ 0.62
Clcn6O35454 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn6O35454 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.95■□□□□ 0.62
Clcn6O35454 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.95■□□□□ 0.62
Clcn6O35454 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.95■□□□□ 0.62
Clcn6O35454 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn6O35454 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Clcn6O35454 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn6O35454 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Clcn6O35454 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.95■□□□□ 0.62
Clcn6O35454 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Clcn6O35454 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn6O35454 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn6O35454 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn6O35454 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms