Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.35■□□□□ 0.69
Tnfrsf11aO35305 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf11aO35305 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf11aO35305 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf11aO35305 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf11aO35305 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.35■□□□□ 0.69
Tnfrsf11aO35305 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf11aO35305 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf11aO35305 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf11aO35305 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf11aO35305 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Tnfrsf11aO35305 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf11aO35305 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11aO35305 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11aO35305 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11aO35305 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11aO35305 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11aO35305 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11aO35305 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11aO35305 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11aO35305 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11aO35305 Idnk-204ENSMUST00000226010 1898 ntBASIC19.34■□□□□ 0.69
Tnfrsf11aO35305 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Tnfrsf11aO35305 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf11aO35305 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf11aO35305 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.33■□□□□ 0.69
Tnfrsf11aO35305 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf11aO35305 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf11aO35305 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf11aO35305 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf11aO35305 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf11aO35305 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf11aO35305 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf11aO35305 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf11aO35305 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.33■□□□□ 0.68
Tnfrsf11aO35305 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf11aO35305 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.33■□□□□ 0.68
Tnfrsf11aO35305 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Tnfrsf11aO35305 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11aO35305 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.32■□□□□ 0.68
Tnfrsf11aO35305 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.32■□□□□ 0.68
Tnfrsf11aO35305 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11aO35305 Trmt13-210ENSMUST00000198454 880 ntBASIC19.32■□□□□ 0.68
Tnfrsf11aO35305 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11aO35305 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11aO35305 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11aO35305 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11aO35305 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 Gm27011-201ENSMUST00000182352 972 ntBASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11aO35305 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Mir2861-201ENSMUST00000175539 82 ntBASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11aO35305 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11aO35305 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11aO35305 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms