Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.01□□□□□ -0.17
Tnfsf11O35235 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf11O35235 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14□□□□□ -0.17
Tnfsf11O35235 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14□□□□□ -0.17
Tnfsf11O35235 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14□□□□□ -0.17
Tnfsf11O35235 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14□□□□□ -0.17
Tnfsf11O35235 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14□□□□□ -0.17
Tnfsf11O35235 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tnfsf11O35235 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tnfsf11O35235 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf11O35235 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.99□□□□□ -0.17
Tnfsf11O35235 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.99□□□□□ -0.17
Tnfsf11O35235 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf11O35235 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.98□□□□□ -0.17
Tnfsf11O35235 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.98□□□□□ -0.17
Tnfsf11O35235 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf11O35235 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Gm9847-201ENSMUST00000052528 599 ntBASIC13.97□□□□□ -0.17
Tnfsf11O35235 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms