Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc2O08811 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ercc2O08811 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc2O08811 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.37■□□□□ 0.53
Ercc2O08811 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.37■□□□□ 0.53
Ercc2O08811 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc2O08811 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc2O08811 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc2O08811 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc2O08811 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ercc2O08811 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.37■□□□□ 0.53
Ercc2O08811 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc2O08811 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc2O08811 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ercc2O08811 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc2O08811 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ercc2O08811 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc2O08811 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc2O08811 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Ercc2O08811 Gm12527-201ENSMUST00000117967 564 ntBASIC18.36■□□□□ 0.53
Ercc2O08811 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc2O08811 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc2O08811 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.36■□□□□ 0.53
Ercc2O08811 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.36■□□□□ 0.53
Ercc2O08811 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc2O08811 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc2O08811 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc2O08811 Mtag2-201ENSMUST00000058665 714 ntBASIC18.36■□□□□ 0.53
Ercc2O08811 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc2O08811 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.36■□□□□ 0.53
Ercc2O08811 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.36■□□□□ 0.53
Ercc2O08811 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc2O08811 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ercc2O08811 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Ercc2O08811 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Gm11249-201ENSMUST00000117071 859 ntBASIC18.35■□□□□ 0.53
Ercc2O08811 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.35■□□□□ 0.53
Ercc2O08811 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ercc2O08811 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ercc2O08811 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ercc2O08811 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ercc2O08811 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ercc2O08811 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.34■□□□□ 0.53
Ercc2O08811 Gm27275-201ENSMUST00000184318 272 ntBASIC18.34■□□□□ 0.53
Ercc2O08811 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ercc2O08811 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ercc2O08811 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ercc2O08811 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ercc2O08811 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.33■□□□□ 0.53
Ercc2O08811 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ercc2O08811 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ercc2O08811 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.33■□□□□ 0.53
Ercc2O08811 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ercc2O08811 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.33■□□□□ 0.53
Ercc2O08811 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ercc2O08811 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.33■□□□□ 0.52
Ercc2O08811 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ercc2O08811 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ercc2O08811 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ercc2O08811 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.33■□□□□ 0.52
Ercc2O08811 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ercc2O08811 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc2O08811 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ercc2O08811 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc2O08811 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc2O08811 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.32■□□□□ 0.52
Ercc2O08811 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.32■□□□□ 0.52
Ercc2O08811 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.32■□□□□ 0.52
Ercc2O08811 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc2O08811 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.32■□□□□ 0.52
Ercc2O08811 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc2O08811 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc2O08811 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc2O08811 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc2O08811 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc2O08811 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc2O08811 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ercc2O08811 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ercc2O08811 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc2O08811 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc2O08811 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc2O08811 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc2O08811 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc2O08811 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc2O08811 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc2O08811 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ercc2O08811 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms