Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Gm2399-201ENSMUST00000104944 225 ntBASIC15.91■□□□□ 0.14
Raet1aO08602 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.91■□□□□ 0.14
Raet1aO08602 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Gm44549-201ENSMUST00000208351 577 ntBASIC15.91■□□□□ 0.14
Raet1aO08602 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.91■□□□□ 0.14
Raet1aO08602 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.91■□□□□ 0.14
Raet1aO08602 Rab3c-203ENSMUST00000224180 967 ntBASIC15.91■□□□□ 0.14
Raet1aO08602 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Raet1aO08602 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raet1aO08602 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Rarb-207ENSMUST00000225921 2756 ntBASIC15.9■□□□□ 0.14
Raet1aO08602 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Raet1aO08602 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.9■□□□□ 0.14
Raet1aO08602 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Raet1aO08602 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Raet1aO08602 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Raet1aO08602 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raet1aO08602 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Raet1aO08602 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.89■□□□□ 0.13
Raet1aO08602 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raet1aO08602 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Raet1aO08602 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raet1aO08602 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Raet1aO08602 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raet1aO08602 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raet1aO08602 Gm5408-201ENSMUST00000197998 747 ntBASIC15.89■□□□□ 0.13
Raet1aO08602 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Raet1aO08602 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Raet1aO08602 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raet1aO08602 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raet1aO08602 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.88■□□□□ 0.13
Raet1aO08602 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.88■□□□□ 0.13
Raet1aO08602 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.88■□□□□ 0.13
Raet1aO08602 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Raet1aO08602 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.88■□□□□ 0.13
Raet1aO08602 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Raet1aO08602 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.88■□□□□ 0.13
Raet1aO08602 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.88■□□□□ 0.13
Raet1aO08602 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Raet1aO08602 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raet1aO08602 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raet1aO08602 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Raet1aO08602 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Raet1aO08602 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raet1aO08602 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raet1aO08602 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Raet1aO08602 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raet1aO08602 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Raet1aO08602 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.87■□□□□ 0.13
Raet1aO08602 Gm10602-201ENSMUST00000098239 609 ntBASIC15.87■□□□□ 0.13
Raet1aO08602 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raet1aO08602 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raet1aO08602 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Raet1aO08602 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Raet1aO08602 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Raet1aO08602 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raet1aO08602 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Raet1aO08602 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Raet1aO08602 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Raet1aO08602 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Raet1aO08602 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Raet1aO08602 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Raet1aO08602 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Raet1aO08602 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.86■□□□□ 0.13
Raet1aO08602 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Raet1aO08602 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Raet1aO08602 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Raet1aO08602 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms