Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdh9F8VPK8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.39■□□□□ 0.53
Pcdh9F8VPK8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Pcdh9F8VPK8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdh9F8VPK8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh9F8VPK8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh9F8VPK8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh9F8VPK8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.39■□□□□ 0.53
Pcdh9F8VPK8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh9F8VPK8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh9F8VPK8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh9F8VPK8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh9F8VPK8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh9F8VPK8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdh9F8VPK8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.35■□□□□ 0.53
Pcdh9F8VPK8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh9F8VPK8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdh9F8VPK8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdh9F8VPK8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh9F8VPK8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh9F8VPK8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh9F8VPK8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdh9F8VPK8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh9F8VPK8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh9F8VPK8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Idnk-204ENSMUST00000226010 1898 ntBASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh9F8VPK8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh9F8VPK8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Pcdh9F8VPK8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh9F8VPK8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh9F8VPK8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh9F8VPK8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh9F8VPK8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdh9F8VPK8 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.33■□□□□ 0.52
Pcdh9F8VPK8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh9F8VPK8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh9F8VPK8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdh9F8VPK8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdh9F8VPK8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms