Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc149F6V035 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc149F6V035 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccdc149F6V035 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc149F6V035 Gm30025-201ENSMUST00000218555 728 ntBASIC18.22■□□□□ 0.51
Ccdc149F6V035 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc149F6V035 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc149F6V035 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc149F6V035 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc149F6V035 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc149F6V035 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc149F6V035 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc149F6V035 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc149F6V035 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc149F6V035 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc149F6V035 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc149F6V035 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc149F6V035 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc149F6V035 Gm9987-201ENSMUST00000069768 567 ntBASIC18.21■□□□□ 0.51
Ccdc149F6V035 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc149F6V035 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc149F6V035 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc149F6V035 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc149F6V035 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc149F6V035 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc149F6V035 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.2■□□□□ 0.5
Ccdc149F6V035 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc149F6V035 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.2■□□□□ 0.5
Ccdc149F6V035 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.2■□□□□ 0.5
Ccdc149F6V035 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc149F6V035 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc149F6V035 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc149F6V035 Gm6433-201ENSMUST00000118634 875 ntBASIC18.2■□□□□ 0.5
Ccdc149F6V035 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc149F6V035 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc149F6V035 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc149F6V035 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ccdc149F6V035 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc149F6V035 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc149F6V035 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ccdc149F6V035 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc149F6V035 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Ccdc149F6V035 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc149F6V035 Gm43799-201ENSMUST00000201845 579 ntBASIC18.19■□□□□ 0.5
Ccdc149F6V035 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.19■□□□□ 0.5
Ccdc149F6V035 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc149F6V035 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc149F6V035 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.19■□□□□ 0.5
Ccdc149F6V035 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc149F6V035 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc149F6V035 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc149F6V035 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.18■□□□□ 0.5
Ccdc149F6V035 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc149F6V035 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc149F6V035 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc149F6V035 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc149F6V035 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc149F6V035 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ccdc149F6V035 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc149F6V035 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.17■□□□□ 0.5
Ccdc149F6V035 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.17■□□□□ 0.5
Ccdc149F6V035 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc149F6V035 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc149F6V035 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc149F6V035 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc149F6V035 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc149F6V035 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Ccdc149F6V035 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.16■□□□□ 0.5
Ccdc149F6V035 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Gm3375-201ENSMUST00000203929 796 ntBASIC18.16■□□□□ 0.5
Ccdc149F6V035 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc149F6V035 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms