Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh17E9PXF0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Gm15565-201ENSMUST00000118890 427 ntBASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh17E9PXF0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Gm13836-201ENSMUST00000121159 501 ntBASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh17E9PXF0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Gm15375-201ENSMUST00000119510 849 ntBASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Mir5122-201ENSMUST00000175004 89 ntBASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh17E9PXF0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Gm43183-201ENSMUST00000200632 547 ntBASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdh17E9PXF0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms