Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gcn1E9PVA8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.25■□□□□ 0.03
Gcn1E9PVA8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gcn1E9PVA8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gcn1E9PVA8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gcn1E9PVA8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gcn1E9PVA8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Gcn1E9PVA8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gcn1E9PVA8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gcn1E9PVA8 Gm14494-201ENSMUST00000118786 435 ntBASIC15.22■□□□□ 0.03
Gcn1E9PVA8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gcn1E9PVA8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.21■□□□□ 0.03
Gcn1E9PVA8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gcn1E9PVA8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gcn1E9PVA8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gcn1E9PVA8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.2■□□□□ 0.02
Gcn1E9PVA8 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.2■□□□□ 0.02
Gcn1E9PVA8 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.2■□□□□ 0.02
Gcn1E9PVA8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.2■□□□□ 0.02
Gcn1E9PVA8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gcn1E9PVA8 Gm10566-201ENSMUST00000086739 996 ntBASIC15.2■□□□□ 0.02
Gcn1E9PVA8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gcn1E9PVA8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gcn1E9PVA8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gcn1E9PVA8 Mir770-201ENSMUST00000103252 94 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms