Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm44771-201ENSMUST00000206975 626 ntBASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Gm9731-201ENSMUST00000209480 747 ntBASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Hfm1D3Z4R1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Hfm1D3Z4R1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Hfm1D3Z4R1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Hfm1D3Z4R1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Hfm1D3Z4R1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Hfm1D3Z4R1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Hfm1D3Z4R1 Gm10418-201ENSMUST00000100943 576 ntBASIC25.32■■□□□ 1.64
Hfm1D3Z4R1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Hfm1D3Z4R1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Hfm1D3Z4R1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Hfm1D3Z4R1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Hfm1D3Z4R1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Hfm1D3Z4R1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Hfm1D3Z4R1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Hfm1D3Z4R1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Hfm1D3Z4R1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Hfm1D3Z4R1 Gm11950-201ENSMUST00000121615 838 ntBASIC25.3■■□□□ 1.64
Hfm1D3Z4R1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Hfm1D3Z4R1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Hfm1D3Z4R1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Hfm1D3Z4R1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Gm18958-201ENSMUST00000174258 762 ntBASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Hfm1D3Z4R1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hfm1D3Z4R1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hfm1D3Z4R1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Hfm1D3Z4R1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hfm1D3Z4R1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Hfm1D3Z4R1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hfm1D3Z4R1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hfm1D3Z4R1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hfm1D3Z4R1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
Hfm1D3Z4R1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Hfm1D3Z4R1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC25.27■■□□□ 1.64
Hfm1D3Z4R1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Hfm1D3Z4R1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Hfm1D3Z4R1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Hfm1D3Z4R1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Hfm1D3Z4R1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC25.27■■□□□ 1.64
Hfm1D3Z4R1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Hfm1D3Z4R1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Hfm1D3Z4R1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC25.27■■□□□ 1.64
Hfm1D3Z4R1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Hfm1D3Z4R1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
Hfm1D3Z4R1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Hfm1D3Z4R1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Hfm1D3Z4R1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
Hfm1D3Z4R1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Hfm1D3Z4R1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC25.26■■□□□ 1.63
Hfm1D3Z4R1 Gm11355-201ENSMUST00000121120 306 ntBASIC25.26■■□□□ 1.63
Hfm1D3Z4R1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC25.26■■□□□ 1.63
Hfm1D3Z4R1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Hfm1D3Z4R1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Hfm1D3Z4R1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Hfm1D3Z4R1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Hfm1D3Z4R1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Hfm1D3Z4R1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Hfm1D3Z4R1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
Hfm1D3Z4R1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Hfm1D3Z4R1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC25.25■■□□□ 1.63
Hfm1D3Z4R1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC25.25■■□□□ 1.63
Hfm1D3Z4R1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC25.25■■□□□ 1.63
Hfm1D3Z4R1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Hfm1D3Z4R1 Gm38308-201ENSMUST00000194934 1809 ntBASIC25.25■■□□□ 1.63
Hfm1D3Z4R1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC25.25■■□□□ 1.63
Hfm1D3Z4R1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Hfm1D3Z4R1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC25.24■■□□□ 1.63
Hfm1D3Z4R1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Hfm1D3Z4R1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Hfm1D3Z4R1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Hfm1D3Z4R1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC25.24■■□□□ 1.63
Hfm1D3Z4R1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Hfm1D3Z4R1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC25.23■■□□□ 1.63
Hfm1D3Z4R1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC25.23■■□□□ 1.63
Hfm1D3Z4R1 Mir3081-201ENSMUST00000175305 84 ntBASIC25.23■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms