Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3543D3Z235 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3543D3Z235 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3543D3Z235 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3543D3Z235 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3543D3Z235 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Gm22240-201ENSMUST00000175225 82 ntBASIC16.22■□□□□ 0.19
Gm3543D3Z235 Gm37856-201ENSMUST00000191634 999 ntBASIC16.22■□□□□ 0.19
Gm3543D3Z235 Trmt13-210ENSMUST00000198454 880 ntBASIC16.22■□□□□ 0.19
Gm3543D3Z235 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.22■□□□□ 0.19
Gm3543D3Z235 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3543D3Z235 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3543D3Z235 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Gm3543D3Z235 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3543D3Z235 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.21■□□□□ 0.18
Gm3543D3Z235 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm3543D3Z235 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm3543D3Z235 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Gm12896-201ENSMUST00000118430 226 ntBASIC16.2■□□□□ 0.18
Gm3543D3Z235 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm3543D3Z235 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Gm13168-201ENSMUST00000121771 632 ntBASIC16.19■□□□□ 0.18
Gm3543D3Z235 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.19■□□□□ 0.18
Gm3543D3Z235 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3543D3Z235 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Gm3543D3Z235 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm3543D3Z235 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm3543D3Z235 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm3543D3Z235 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm3543D3Z235 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm3543D3Z235 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm3543D3Z235 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm3543D3Z235 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm3543D3Z235 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Gm3543D3Z235 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.18■□□□□ 0.18
Gm3543D3Z235 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Gm3543D3Z235 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Gm3543D3Z235 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm3543D3Z235 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3543D3Z235 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm3543D3Z235 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3543D3Z235 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3543D3Z235 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms