Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Gm28033-201ENSMUST00000184224 96 ntBASIC16.03■□□□□ 0.16
Shank1D3YZU1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Shank1D3YZU1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Shank1D3YZU1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shank1D3YZU1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shank1D3YZU1 Notumos-201ENSMUST00000151998 2659 ntBASIC16.02■□□□□ 0.16
Shank1D3YZU1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.02■□□□□ 0.16
Shank1D3YZU1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shank1D3YZU1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Shank1D3YZU1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Shank1D3YZU1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shank1D3YZU1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shank1D3YZU1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Shank1D3YZU1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Shank1D3YZU1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Shank1D3YZU1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
Shank1D3YZU1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shank1D3YZU1 Gm7461-201ENSMUST00000058918 827 ntBASIC16.02■□□□□ 0.15
Shank1D3YZU1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shank1D3YZU1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shank1D3YZU1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Shank1D3YZU1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16■□□□□ 0.15
Shank1D3YZU1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16■□□□□ 0.15
Shank1D3YZU1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Shank1D3YZU1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Dapk1-207ENSMUST00000226059 5009 ntBASIC16■□□□□ 0.15
Shank1D3YZU1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16■□□□□ 0.15
Shank1D3YZU1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16■□□□□ 0.15
Shank1D3YZU1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16■□□□□ 0.15
Shank1D3YZU1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shank1D3YZU1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Gm2274-201ENSMUST00000184539 609 ntBASIC15.99■□□□□ 0.15
Shank1D3YZU1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.99■□□□□ 0.15
Shank1D3YZU1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Gm17661-201ENSMUST00000170317 270 ntBASIC15.99■□□□□ 0.15
Shank1D3YZU1 Gm5587-201ENSMUST00000206270 674 ntBASIC15.99■□□□□ 0.15
Shank1D3YZU1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shank1D3YZU1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Shank1D3YZU1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Shank1D3YZU1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms