Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx8D3YU81 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx8D3YU81 Flg-201ENSMUST00000050758 1488 ntBASIC19.01■□□□□ 0.63
Rfx8D3YU81 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx8D3YU81 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx8D3YU81 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx8D3YU81 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfx8D3YU81 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx8D3YU81 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Rfx8D3YU81 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx8D3YU81 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rfx8D3YU81 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfx8D3YU81 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19■□□□□ 0.63
Rfx8D3YU81 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfx8D3YU81 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rfx8D3YU81 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.99■□□□□ 0.63
Rfx8D3YU81 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx8D3YU81 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.99■□□□□ 0.63
Rfx8D3YU81 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx8D3YU81 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx8D3YU81 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx8D3YU81 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx8D3YU81 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx8D3YU81 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx8D3YU81 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx8D3YU81 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx8D3YU81 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.98■□□□□ 0.63
Rfx8D3YU81 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.98■□□□□ 0.63
Rfx8D3YU81 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx8D3YU81 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx8D3YU81 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx8D3YU81 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx8D3YU81 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rfx8D3YU81 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx8D3YU81 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx8D3YU81 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.97■□□□□ 0.63
Rfx8D3YU81 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx8D3YU81 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx8D3YU81 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx8D3YU81 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Rfx8D3YU81 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx8D3YU81 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx8D3YU81 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rfx8D3YU81 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx8D3YU81 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx8D3YU81 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx8D3YU81 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx8D3YU81 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx8D3YU81 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.95■□□□□ 0.62
Rfx8D3YU81 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx8D3YU81 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx8D3YU81 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.95■□□□□ 0.62
Rfx8D3YU81 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.95■□□□□ 0.62
Rfx8D3YU81 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.95■□□□□ 0.62
Rfx8D3YU81 Gm20049-201ENSMUST00000219950 730 ntBASIC18.95■□□□□ 0.62
Rfx8D3YU81 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx8D3YU81 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx8D3YU81 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx8D3YU81 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx8D3YU81 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.94■□□□□ 0.62
Rfx8D3YU81 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx8D3YU81 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx8D3YU81 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx8D3YU81 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx8D3YU81 Dio3-201ENSMUST00000097228 1449 ntBASIC18.94■□□□□ 0.62
Rfx8D3YU81 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx8D3YU81 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx8D3YU81 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx8D3YU81 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.94■□□□□ 0.62
Rfx8D3YU81 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx8D3YU81 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx8D3YU81 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx8D3YU81 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms