Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Gm10418-201ENSMUST00000100943 576 ntBASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Gm25016-201ENSMUST00000158399 131 ntBASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a6B1AVK5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.59■□□□□ 0.57
Col4a6B1AVK5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Col4a6B1AVK5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a6B1AVK5 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.59■□□□□ 0.57
Col4a6B1AVK5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a6B1AVK5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a6B1AVK5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a6B1AVK5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.59■□□□□ 0.57
Col4a6B1AVK5 Gm9731-201ENSMUST00000209480 747 ntBASIC18.59■□□□□ 0.57
Col4a6B1AVK5 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.59■□□□□ 0.57
Col4a6B1AVK5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a6B1AVK5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a6B1AVK5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a6B1AVK5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a6B1AVK5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a6B1AVK5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.58■□□□□ 0.57
Col4a6B1AVK5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a6B1AVK5 Gm28033-201ENSMUST00000184224 96 ntBASIC18.58■□□□□ 0.57
Col4a6B1AVK5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a6B1AVK5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Col4a6B1AVK5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Col4a6B1AVK5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Col4a6B1AVK5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a6B1AVK5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a6B1AVK5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a6B1AVK5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a6B1AVK5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Col4a6B1AVK5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a6B1AVK5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a6B1AVK5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Col4a6B1AVK5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a6B1AVK5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a6B1AVK5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.57■□□□□ 0.56
Col4a6B1AVK5 Gm13474-201ENSMUST00000122466 815 ntBASIC18.57■□□□□ 0.56
Col4a6B1AVK5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a6B1AVK5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a6B1AVK5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Col4a6B1AVK5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a6B1AVK5 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.57■□□□□ 0.56
Col4a6B1AVK5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a6B1AVK5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Col4a6B1AVK5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.57■□□□□ 0.56
Col4a6B1AVK5 Gm9013-201ENSMUST00000132939 882 ntBASIC18.57■□□□□ 0.56
Col4a6B1AVK5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Col4a6B1AVK5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Gm29518-201ENSMUST00000190858 372 ntBASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Col4a6B1AVK5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a6B1AVK5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a6B1AVK5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a6B1AVK5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.55■□□□□ 0.56
Col4a6B1AVK5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a6B1AVK5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a6B1AVK5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Col4a6B1AVK5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a6B1AVK5 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.55■□□□□ 0.56
Col4a6B1AVK5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Gm29791-202ENSMUST00000207888 369 ntBASIC18.54■□□□□ 0.56
Col4a6B1AVK5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Il3ra-202ENSMUST00000223589 738 ntBASIC18.54■□□□□ 0.56
Col4a6B1AVK5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a6B1AVK5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms