Protein–RNA interactions for Protein: B1AUS7

Ssxa1, Protein SSXA1, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxa1B1AUS7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssxa1B1AUS7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssxa1B1AUS7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Ssxa1B1AUS7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ssxa1B1AUS7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssxa1B1AUS7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssxa1B1AUS7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ssxa1B1AUS7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssxa1B1AUS7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssxa1B1AUS7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssxa1B1AUS7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssxa1B1AUS7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Ssxa1B1AUS7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssxa1B1AUS7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssxa1B1AUS7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssxa1B1AUS7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssxa1B1AUS7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ssxa1B1AUS7 Gm27275-201ENSMUST00000184318 272 ntBASIC17.08■□□□□ 0.32
Ssxa1B1AUS7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.08■□□□□ 0.32
Ssxa1B1AUS7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssxa1B1AUS7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssxa1B1AUS7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssxa1B1AUS7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssxa1B1AUS7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssxa1B1AUS7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 Gm11249-201ENSMUST00000117071 859 ntBASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssxa1B1AUS7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms