Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Col6a5A6H584 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC13.59□□□□□ -0.23
Col6a5A6H584 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.59□□□□□ -0.23
Col6a5A6H584 Dmtn-209ENSMUST00000228295 2572 ntBASIC13.59□□□□□ -0.23
Col6a5A6H584 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.59□□□□□ -0.23
Col6a5A6H584 Mir2861-201ENSMUST00000175539 82 ntBASIC13.59□□□□□ -0.23
Col6a5A6H584 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Col6a5A6H584 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.59□□□□□ -0.23
Col6a5A6H584 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Col6a5A6H584 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col6a5A6H584 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.59□□□□□ -0.23
Col6a5A6H584 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.59□□□□□ -0.23
Col6a5A6H584 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 Gm12504-201ENSMUST00000120860 2231 ntBASIC13.59□□□□□ -0.23
Col6a5A6H584 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Col6a5A6H584 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a5A6H584 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.58□□□□□ -0.23
Col6a5A6H584 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Col6a5A6H584 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Col6a5A6H584 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.58□□□□□ -0.24
Col6a5A6H584 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Col6a5A6H584 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.58□□□□□ -0.24
Col6a5A6H584 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col6a5A6H584 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Mir5126-201ENSMUST00000175513 77 ntBASIC13.58□□□□□ -0.24
Col6a5A6H584 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Col6a5A6H584 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.58□□□□□ -0.24
Col6a5A6H584 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a5A6H584 Gm10566-201ENSMUST00000086739 996 ntBASIC13.58□□□□□ -0.24
Col6a5A6H584 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a5A6H584 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.57□□□□□ -0.24
Col6a5A6H584 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a5A6H584 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a5A6H584 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.57□□□□□ -0.24
Col6a5A6H584 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.57□□□□□ -0.24
Col6a5A6H584 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a5A6H584 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC13.57□□□□□ -0.24
Col6a5A6H584 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a5A6H584 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.57□□□□□ -0.24
Col6a5A6H584 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a5A6H584 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a5A6H584 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a5A6H584 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a5A6H584 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.56□□□□□ -0.24
Col6a5A6H584 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a5A6H584 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a5A6H584 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a5A6H584 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a5A6H584 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.56□□□□□ -0.24
Col6a5A6H584 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.56□□□□□ -0.24
Col6a5A6H584 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a5A6H584 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.56□□□□□ -0.24
Col6a5A6H584 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.56□□□□□ -0.24
Col6a5A6H584 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a5A6H584 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a5A6H584 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.56□□□□□ -0.24
Col6a5A6H584 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.56□□□□□ -0.24
Col6a5A6H584 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.56□□□□□ -0.24
Col6a5A6H584 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col6a5A6H584 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a5A6H584 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a5A6H584 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.55□□□□□ -0.24
Col6a5A6H584 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a5A6H584 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a5A6H584 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col6a5A6H584 Gm7213-201ENSMUST00000215977 950 ntBASIC13.55□□□□□ -0.24
Col6a5A6H584 Gm10175-201ENSMUST00000086013 645 ntBASIC13.55□□□□□ -0.24
Col6a5A6H584 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a5A6H584 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a5A6H584 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a5A6H584 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a5A6H584 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a5A6H584 Gm10418-201ENSMUST00000100943 576 ntBASIC13.55□□□□□ -0.24
Col6a5A6H584 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a5A6H584 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a5A6H584 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.55□□□□□ -0.24
Col6a5A6H584 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms