Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm7729-201ENSMUST00000050143 801 ntBASIC14.65□□□□□ -0.06
Chd6A3KFM7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd6A3KFM7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd6A3KFM7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Chd6A3KFM7 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.65□□□□□ -0.07
Chd6A3KFM7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.65□□□□□ -0.07
Chd6A3KFM7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
Chd6A3KFM7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Gm15920-201ENSMUST00000118998 402 ntBASIC14.64□□□□□ -0.07
Chd6A3KFM7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.64□□□□□ -0.07
Chd6A3KFM7 Gm10060-201ENSMUST00000212002 111 ntBASIC14.64□□□□□ -0.07
Chd6A3KFM7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.64□□□□□ -0.07
Chd6A3KFM7 Gm15794-201ENSMUST00000120182 631 ntBASIC14.64□□□□□ -0.07
Chd6A3KFM7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.64□□□□□ -0.07
Chd6A3KFM7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd6A3KFM7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chd6A3KFM7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chd6A3KFM7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chd6A3KFM7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chd6A3KFM7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chd6A3KFM7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chd6A3KFM7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chd6A3KFM7 Gm14822-201ENSMUST00000122247 291 ntBASIC14.63□□□□□ -0.07
Chd6A3KFM7 Mir6349-201ENSMUST00000184059 97 ntBASIC14.63□□□□□ -0.07
Chd6A3KFM7 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.63□□□□□ -0.07
Chd6A3KFM7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chd6A3KFM7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Chd6A3KFM7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chd6A3KFM7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.62□□□□□ -0.07
Chd6A3KFM7 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.62□□□□□ -0.07
Chd6A3KFM7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Chd6A3KFM7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chd6A3KFM7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.61□□□□□ -0.07
Chd6A3KFM7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Gm24513-201ENSMUST00000174964 138 ntBASIC14.61□□□□□ -0.07
Chd6A3KFM7 Mir1668-201ENSMUST00000184114 107 ntBASIC14.61□□□□□ -0.07
Chd6A3KFM7 Gm27321-201ENSMUST00000185021 205 ntBASIC14.61□□□□□ -0.07
Chd6A3KFM7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chd6A3KFM7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chd6A3KFM7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.6□□□□□ -0.07
Chd6A3KFM7 Gm12350-201ENSMUST00000121208 462 ntBASIC14.6□□□□□ -0.07
Chd6A3KFM7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms