Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav12d-1A0N8R0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12d-1A0N8R0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12d-1A0N8R0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav12d-1A0N8R0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav12d-1A0N8R0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-1A0N8R0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-1A0N8R0 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.44□□□□□ -0.1
Trav12d-1A0N8R0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-1A0N8R0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav12d-1A0N8R0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-1A0N8R0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-1A0N8R0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav12d-1A0N8R0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-1A0N8R0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-1A0N8R0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-1A0N8R0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-1A0N8R0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav12d-1A0N8R0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Gm45417-201ENSMUST00000209533 758 ntBASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Gm9988-201ENSMUST00000069786 435 ntBASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav12d-1A0N8R0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms