Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.86■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.83■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Atg4a-psA0A0G2JFS9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Atg4a-psA0A0G2JFS9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.83■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Atg4a-psA0A0G2JFS9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.82■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atg4a-psA0A0G2JFS9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.81■■□□□ 1.08
Atg4a-psA0A0G2JFS9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.81■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.81■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atg4a-psA0A0G2JFS9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms