Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.32■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.32■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.32■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gm12382-201ENSMUST00000122005 922 ntBASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gm715-201ENSMUST00000117865 831 ntBASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V3A0A0G2JEW2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.27■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms