Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.07□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-2A0A0G2JDP3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Gm27405-201ENSMUST00000184201 112 ntBASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Gm22325-201ENSMUST00000158904 308 ntBASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9n-2A0A0G2JDP3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms