Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Gm10418-201ENSMUST00000100943 576 ntBASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Gm29791-202ENSMUST00000207888 369 ntBASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv5-43A0A0B4J1J2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.34■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.33■□□□□ 0.52
Igkv5-43A0A0B4J1J2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.33■□□□□ 0.52
Igkv5-43A0A0B4J1J2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.33■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gm10517-202ENSMUST00000192970 758 ntBASIC18.32■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Odf3b-204ENSMUST00000227834 930 ntBASIC18.32■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms