Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv16A0A0B4J1H3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.02□□□□□ -0.33
Trbv16A0A0B4J1H3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trbv16A0A0B4J1H3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trbv16A0A0B4J1H3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv16A0A0B4J1H3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trbv16A0A0B4J1H3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv16A0A0B4J1H3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Gm13234-201ENSMUST00000120010 747 ntBASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv16A0A0B4J1H3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv16A0A0B4J1H3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv16A0A0B4J1H3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms