Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv2A0A0B4J1G8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.96■□□□□ 0.15
Trbv2A0A0B4J1G8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv2A0A0B4J1G8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.96■□□□□ 0.15
Trbv2A0A0B4J1G8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.96■□□□□ 0.15
Trbv2A0A0B4J1G8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv2A0A0B4J1G8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv2A0A0B4J1G8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv2A0A0B4J1G8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trbv2A0A0B4J1G8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv2A0A0B4J1G8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv2A0A0B4J1G8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv2A0A0B4J1G8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv2A0A0B4J1G8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv2A0A0B4J1G8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Gm27454-201ENSMUST00000185090 204 ntBASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Idnk-204ENSMUST00000226010 1898 ntBASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv2A0A0B4J1G8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv2A0A0B4J1G8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Gm43060-201ENSMUST00000200621 289 ntBASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv2A0A0B4J1G8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv2A0A0B4J1G8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv2A0A0B4J1G8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv2A0A0B4J1G8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv2A0A0B4J1G8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trbv2A0A0B4J1G8 Gm43017-201ENSMUST00000198296 752 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms