Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv1A0A0B4J1G7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv1A0A0B4J1G7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv1A0A0B4J1G7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv1A0A0B4J1G7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.09□□□□□ -0.15
Trbv1A0A0B4J1G7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trbv1A0A0B4J1G7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv1A0A0B4J1G7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.08□□□□□ -0.15
Trbv1A0A0B4J1G7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv1A0A0B4J1G7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv1A0A0B4J1G7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv1A0A0B4J1G7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv1A0A0B4J1G7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv1A0A0B4J1G7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv1A0A0B4J1G7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trbv1A0A0B4J1G7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trbv1A0A0B4J1G7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trbv1A0A0B4J1G7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv1A0A0B4J1G7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv1A0A0B4J1G7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv1A0A0B4J1G7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.04□□□□□ -0.16
Trbv1A0A0B4J1G7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms