Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sirpb1aA0A0A6YYP6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.02■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.02■□□□□ 0.31
Sirpb1aA0A0A6YYP6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Gm37374-201ENSMUST00000194954 1829 ntBASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Gm6139-201ENSMUST00000079261 882 ntBASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Gm37194-201ENSMUST00000193092 3031 ntBASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.98■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.98■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sirpb1aA0A0A6YYP6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sirpb1aA0A0A6YYP6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms