Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-42A0A0A6YY38 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-42A0A0A6YY38 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-42A0A0A6YY38 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-42A0A0A6YY38 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-42A0A0A6YY38 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-42A0A0A6YY38 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-42A0A0A6YY38 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-42A0A0A6YY38 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-42A0A0A6YY38 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-42A0A0A6YY38 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm13559-201ENSMUST00000120476 863 ntBASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-42A0A0A6YY38 Tgds-204ENSMUST00000228543 1594 ntBASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm11539-201ENSMUST00000119837 557 ntBASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm13436-201ENSMUST00000120418 567 ntBASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm10231-201ENSMUST00000181584 441 ntBASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm10517-202ENSMUST00000192970 758 ntBASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm10175-202ENSMUST00000208752 441 ntBASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-42A0A0A6YY38 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-42A0A0A6YY38 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm10418-201ENSMUST00000100943 576 ntBASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-42A0A0A6YY38 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-42A0A0A6YY38 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.53■□□□□ 0.24
Ighv1-42A0A0A6YY38 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-42A0A0A6YY38 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.53■□□□□ 0.24
Ighv1-42A0A0A6YY38 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-42A0A0A6YY38 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-42A0A0A6YY38 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ighv1-42A0A0A6YY38 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-42A0A0A6YY38 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-42A0A0A6YY38 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-42A0A0A6YY38 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-42A0A0A6YY38 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-42A0A0A6YY38 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.52■□□□□ 0.24
Ighv1-42A0A0A6YY38 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms