Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-7A0A075B6B0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-7A0A075B6B0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-7A0A075B6B0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-7A0A075B6B0 Mir5133-201ENSMUST00000174955 77 ntBASIC13.86□□□□□ -0.19
Trav6d-7A0A075B6B0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-7A0A075B6B0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-7A0A075B6B0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-7A0A075B6B0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-7A0A075B6B0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-7A0A075B6B0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-7A0A075B6B0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav6d-7A0A075B6B0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Fst-202ENSMUST00000223640 2612 ntBASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav6d-7A0A075B6B0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6d-7A0A075B6B0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Gm13146-201ENSMUST00000118508 780 ntBASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-7A0A075B6B0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-7A0A075B6B0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav6d-7A0A075B6B0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-7A0A075B6B0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms