Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Gm12527-201ENSMUST00000117967 564 ntBASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-7A0A075B6A6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-7A0A075B6A6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 Gm27275-201ENSMUST00000184318 272 ntBASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-7A0A075B6A6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav6n-7A0A075B6A6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6n-7A0A075B6A6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6n-7A0A075B6A6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Trav6n-7A0A075B6A6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6n-7A0A075B6A6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6n-7A0A075B6A6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Gm11249-201ENSMUST00000117071 859 ntBASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Gm37856-201ENSMUST00000191634 999 ntBASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Mtag2-201ENSMUST00000058665 714 ntBASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6n-7A0A075B6A6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms