Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-2A0A075B649 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13-2A0A075B649 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13-2A0A075B649 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Smad6-203ENSMUST00000179458 273 ntBASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13-2A0A075B649 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Gm27801-201ENSMUST00000184174 223 ntBASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Mir7075-201ENSMUST00000184187 82 ntBASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms